seq="MKTLGEFIVEKQH"
, k=4
.
- Kmers:
['MKTL', 'KTLG', 'TLGE', 'LGEF', 'GEFI', 'EFIV', 'FIVE', 'IVEK', 'VEKQ', 'EKQH']
- Encodings:
[5057, 15385, 49556, 6470, 37986, 17954, 25124, 8771, 9268, 17226]
- Check:
Kmer | K-mer Binary Mapping | Encoding | Check |
"MKTL" | 0001 0011 1100 0001 | 5057 | ✔️ |
"KTLG" | 0011 1100 0001 1001 | 15385 | ✔️ |
"TLGE" | 1100 0001 1001 0100 | 49556 | ✔️ |
"LGEF" | 0001 1001 0100 0110 | 6470 | ✔️ |
"GEFI" | 1001 0100 0110 0010 | 37986 | ✔️ |
"EFIV" | 0100 0110 0010 0010 | 17954 | ✔️ |
"FIVE" | 0110 0010 0010 0100 | 25124 | ✔️ |
"IVEK" | 0010 0010 0100 0011 | 8771 | ✔️ |
"VEKQ" | 0010 0100 0011 0100 | 9268 | ✔️ |
"EKQH" | 0100 0011 0100 1010 | 17226 | ✔️ |