Encoding methods

Encoding the raw data is the first thing we need to think of when we want to use ML for analyzing.

Encoding is the process of transforming raw data (text, images, audio) into a structured, numerical format that computers can readily process.

If we take protein sequence data as the example,

This is a way I learned from one paper.

Altae-Tran, Han, et al. "Uncovering the functional diversity of rare CRISPR-Cas systems with deep terascale clustering." Science 382.6673 (2023): eadi1910.